Table 2.

The top 10 genera correlated to alpha diversity indexes

Chao1PD_whole_treeObserved_otuShannonSimpson
GenusRhoPGenusRhoPGenusRhoPGenusRhoPGenusRhoP
Campylobacter0.5432361.42E–11Campylobacter0.6173032.51E—15Acinetobacter0.5647711.43E–12Lactobacillus−0.746366.36E–25Lactobacillus−0.711847.67E–22
Finegoldia0.3930372.87E–06Burkholderia0.4914211.90E–09Burkholderia0.5625951.82E–12Prevotella0.6926052.59E–20Prevotella0.6722658.02E–19
Bacteroides0.3865274.32E–06Pseudomonas0.4871622.74E–09Campylobacter0.5533014.96E–12Dialister0.5991512.57E–14Dialister0.5867841.15E–13
Corynebacterium0.3706311.13E–05Acinetobacter0.4839683.60E–09Pseudomonas0.5500157.02E–12Peptoniphilus0.5132372.67E–10Gardnerella0.5153562.19E–10
Porphyromonas0.3683561.29E–05Corynebacterium0.4835133.74E–09Corynebacterium0.5218111.19E–10Gardnerella0.5001988.77E–10Peptoniphilus0.4706031.09E–08
Roseburia0.3662481.45E–05Halorubrum0.4578763.00E–08Halorubrum0.5103213.50E–10Anaerococcus0.4601972.50E–08Parvimonas0.4157286.48E–07
Peptoniphilus0.3570152.46E–05Halorientalis0.4576823.05E–08Halorientalis0.5050365.68E–10Porphyromonas0.4491375.88E–08Anaerococcus0.4080831.08E–06
Varibaculum0.3535522.99E–05Sphingomonas0.4549233.77E–08Methylobacterium0.4870842.76E–09Parvimonas0.4013431.69E–06Porphyromonas0.4063041.22E–06
Ezakiella0.3477974.10E–05Peptoniphilus0.4386291.29E–07Sphingomonas0.485013.29E–09Sneathia0.3835395.19E–06Sneathia0.3979862.10E–06
Ruminococcus0.3420555.58E–05Methylobacterium0.4325062.00E–07Phyllobacterium0.4725729.29E–09Peptostreptococcus0.3753818.50E–06Atopobium0.3970012.23E–06